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HanwooGDB
Statistics Information of HanwooGDB
  Variant Number of Each Chromosome     [Reference genome : UMD3.1 ( Bos Taurus6 )]
This table present the number of Identified SNPs and InDels for each chromosome.
Known SNPs and InDels are based on Ensembl database
ChromosomeSNPsInDelsKnown_SNPsKnown_InDels700kchipAverage
11,119,780122,710381,80110,110   
2895,72497,338292,2358,597   
3866,82287,622278,6407,715   
4899,09396,332286,6147,732   
5823,41086,241258,5127,588   
6848,95693,549292,8957,856   
7734,26079,485245,6076,438   
8755,55582,792243,0746,595   
9701,10077,883232,3626,749   
10716,10774,351238,8266,663   
11723,80674,953244,0076,883   
12777,89677,733209,2015,470   
13585,61458,704186,2275277   
14583,08561,577198,1465,336   
15650,94766,536218,9725,252   
16565,06658,715186,7874,828   
17543,25957,817185,5995,283   
18461,83945,488159,7573,982   
19445,65643,922149,6694,031   
20507,23253,779184,5294,989   
21489,89950,335156,9664,216   
22404,15942,709147,7244,061   
23504,18047,171143,2563,843   
24466,68347,738143,8164,262   
25328,37530,601109,4752,615   
26363,34537,520128,5443,199   
27347,63237,561115,7512,917   
28357,33036,432126,4753,413   
29430,01141,202143,9933,570   
X194600   
MT418,59457,65587,6231,960   
Total18,315,6091,926,4575,977,083161,430   


  Variant Number and density distribution
These graphs show the correlation between the chromosome length and the number of identified variant sites.
The number of identified variant sites increases as the chromosome length increases.